Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879299.1_cds_XP_016437075.1_32872
CDS Infomation

[gene=LOC107763143] [db_xref=GeneID:107763143] [protein=putative FBD-associated F-box protein At5g56400 isoform X2] [protein_id=XP_016437075.1] [location=complement(join(15894..16145,16254..16427,16526..17875))] [gbkey=CDS]
Sequence

ATGAAGAAAAGGAAAAGAAAGGGCGCAAGACAGAGAAAGGTAAACACTAAAAAGGGAAAG
AGAATGGAGATCACCAACACAGATGGAAGAGCAGCTGATGATGCGGACAGGATCTCTGAG
TTGCCTGAACACATTTTACATCACATCCTTTGTCTTCTCCGCTGGCCAAAGGATATTGTG
AGAACTAGCATCCTGTCCAAGAAGTGGAAAGTCATTTGGGAATCTTTGACTTCCGTTGAT
TTTGATCAGAGGCGCTTCCAAAATCATAAGGTTGGAGCTTCAAATGATCTCCAATCTCCA
CCAGTGGAGGAACAGAGCGCAAGTTTCAAGCAGGTGTTTAAGGAATCCCTGAAAGCTGGA
TATGTAGATCTGCGATTAATGAAGTTCATTCTGTTTGTTGAGAACACCTTAGCAACCAGA
ATTGAACCATTGCCAAGTATACAAAAGTTCAGGCTGCATGTCTCCTCTTTTGTTGCTGAT
CTTATGACTCCCTATATGAATAACTGGATTAGTGTTGCTACTGACAAGAATGTTAAAGAG
CTTGATATCCATGTGAAGAAGGCTGATGATGTGTATGAGAATGTGGTTAGCCAATGTTAT
GTACTGCCTCAGGTGGTCTTTGCTTCCAGGACAATAACTTCATTGAAACTCCACGGATGT
GGAATGGATGTTTCTGCTGTCATAAAGCTCCAAAACCTGCAGGAGCTATCCATGAAAGCT
ATGCGTATCAATGAGAATGTAGTCCATAAGTTTGTCCAAGGCTGCCCTTTGATCGAAGAT
ATGCGACTGATCAAGTGCCATCTTTTGAAATTCTTGCATGTCTCAACTCTGCCTAAACTA
AAAAGGTTGGAAGTACATGAGGGCTCCAACCTCAGGTCGGTCAAACTAGAGGCACCCAAT
CTTGAGACATTTTGGTTCCACGGAAAGAAATCTTCAAGGTGCAAATTAATCTTAGCAGGG
TGCGGAAATCTTAAGAATTTGATGTTGAGGCATACACACATGTCGGATAAGTCATTTCAG
GAACGTATCGCCGAATTCCCATTACTTGAAAACTTGTTCCTGTTAGAGTGCCATGCATTG
CGGAGGATGACAATATTGAGTGACAAGCTGAAGAAGCTTTCAGTAGTAAGGTGCAGCAAA
CTAAAGGAAGCCAACATTGATGCACCAAATCTACTTTCATTTGAATATACTGGTATTGAG
CTGCCTTTTTCTTCCATGAATGCTTCACAGTTGCAAGAAGTGAAGCTTCACTTGAAATCC
CAAAAACAGAAGTTTCACCCTCTTGAAGTTCAGAAATTCGTTCAAGGGTTCGAAGCTAAA
GGTTTCAAGTTGTTTCTTGCCTCTAAACAGGATGTGATTATCTATGAGGAAATGAGAGGA
ATCCATCTTCTTCCCTCTAGAGACTTCAAGATAGAATTGACTAAATCATCAAGAGTACTG
AAAAATCTTCTCAGCAGTCACTTGCGTCAGTTTCACCCAAAAACTCTTATTTTAATGACA
TCTCCCAGCAGTGACCTTCTCGCGTTCAAAAAGGAGATCATGATGAACAAAGAGAAGACT
CCTAGCTGTTGTAAATATTACTCAAAGAAATGCTGGCGACATTATTTAGAAGACATTAGA
ATGTTTGAGTTTTCTCCGTCTAATATAAATCCCAATACGAGTTTTGAACTAAAGTGGAGA
TCGTCACCCTTGCCGCTGCCGGAAGATACAGACATAACAGAAATGGACGAGTCAATGGTG
CATAGGGATACAGAGCTAACTGATGTCGATGAGTAA

Peptide Sequence

PEP ID

XP_016437075.1
PEP Infomation

PREDICTED: putative FBD-associated F-box protein At5g56400 isoform X2 [Nicotiana tabacum]
Sequence

MKKRKRKGARQRKVNTKKGKRMEITNTDGRAADDADRISELPEHILHHILCLLRWPKDIV
RTSILSKKWKVIWESLTSVDFDQRRFQNHKVGASNDLQSPPVEEQSASFKQVFKESLKAG
YVDLRLMKFILFVENTLATRIEPLPSIQKFRLHVSSFVADLMTPYMNNWISVATDKNVKE
LDIHVKKADDVYENVVSQCYVLPQVVFASRTITSLKLHGCGMDVSAVIKLQNLQELSMKA
MRINENVVHKFVQGCPLIEDMRLIKCHLLKFLHVSTLPKLKRLEVHEGSNLRSVKLEAPN
LETFWFHGKKSSRCKLILAGCGNLKNLMLRHTHMSDKSFQERIAEFPLLENLFLLECHAL
RRMTILSDKLKKLSVVRCSKLKEANIDAPNLLSFEYTGIELPFSSMNASQLQEVKLHLKS
QKQKFHPLEVQKFVQGFEAKGFKLFLASKQDVIIYEEMRGIHLLPSRDFKIELTKSSRVL
KNLLSSHLRQFHPKTLILMTSPSSDLLAFKKEIMMNKEKTPSCCKYYSKKCWRHYLEDIR
MFEFSPSNINPNTSFELKWRSSPLPLPEDTDITEMDESMVHRDTELTDVDE

Transcript Sequence

Gene sequence data has not been registered.